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Fruit fly gene from 'out of nowhere' is discovered

Scientists thought that most new genes were formed from existing genes, but Cornell researchers have discovered a gene in some fruit flies that appears to be unrelated to other genes in any known genome.

The new gene, called hydra, exists in only a small number of species of Drosophila fruit flies, which suggests it was created about 13 million years ago, when these melanogaster subgroup species diverged from a common ancestor.

And early evidence indicates that the new gene is functional (as opposed to being nonfunctional "junk" DNA) and is likely to express a protein involved in late stages of sperm cell development (spermatogenesis). This finding is consistent with work of other scientists who are discovering that many of the most recently formed functional genes in any species also are expressed in male testes and appear related to spermatogenesis.

"This is a de novo -- 'out of nowhere' -- gene," said Hsiao-Pei Yang, a senior research associate in Cornell's Department of Molecular Biology and Genetics and senior author of a paper published in the July 6 issue of the online journal PLoS Genetics (Public Library of Science Genetics). "People used to think that new genes were always formed from tinkering with other genes, but with this gene we can find no homologues [genes with a similar structure]. You cannot find any related genes in the fly genome or any species' genome, and that is what is unique."

Yang conducted part of this research while at the National Yang-Ming University in Taiwan and part of the work in collaboration with Cornell's Daniel Barbash, assistant professor of molecular biology and genetics.

The researchers do not yet know how the hydra gene was created, but they speculate that the gene may have developed from a piece of DNA junk called a transposable element (also known as a "jumping gene"), which may have been inserted into the genome by a virus. These transposons are k
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Cornell University News Service
23-Jul-2007


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