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Textbook explanation of mRNA translation may need rethinking

Our understanding of how messenger RNAs are translated into proteins is challenged by new research published today in the Open Access journal Journal of Biology. The study suggests that EF-G, the GTPase that facilitates tRNA translocation in bacteria, enters the ribosome bound to a different guanine nucleotide than previously thought GDP, not GTP. The ribosome itself then seems to act as the guanine-nucleotide exchange factor, not some as-yet-unidentified factor as previously assumed. This finding questions the prevailing model for RNA translocation.

According to the textbook model EF-G provides the energy needed for the translocation phase of translation by bringing GTP into the ribosome where GTP is subsequently hydrolysed into GDP.

Andrei Zavialov, Vasili Hauryliuk and Mns Ehrenberg from Uppsala University in Sweden first performed an important purification step ensuring that their GTP was not contaminated by GDP (and vice versa), as had been the case with previous studies using these purified components. They next measured the affinity of EF-G for GTP and GDP. Their results strongly suggest that EF-G is bound to GDP in the cytoplasm and that it binds to the pre-translocation complex - composed of the ribosome, tRNA and mRNA strand as a EF-G-GDP complex. The ribosome itself then seems to act as a GTP exchange factor that swaps GDP for GTP, which results in a modification in the structure of the ribosome. This triggers partial translocation of the mRNA, which is completed after GTP hydrolysis. "Our results suggest that the ribosome plays a previously unidentified dual role of both guanine-nucleotide exchange factor and GTPase-activating protein" explain the authors. EF-G then detaches from the ribosome in its GDP-bound form, ready to be used again by another ribosome.

These findings differ radically from all previous models and as such may represent a considerable step forward in our understanding of translocation, a fundamental mechanis
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Contact: Juliette Savin
juliette@biomedcentral.com
44-207-631-9931
BioMed Central
26-Jun-2005


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